J4_8G2U_013

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAG*UGC

Length

23 nucleotides

Bulged bases

8G2U|1|v|C|183, 8G2U|1|v|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G2U|1|v|G|142
8G2U|1|v|A|143
8G2U|1|v|G|144
8G2U|1|v|G|145
8G2U|1|v|G|146
*
8G2U|1|v|C|176
8G2U|1|v|G|177
8G2U|1|v|C|178
8G2U|1|v|A|179
8G2U|1|v|U|180
8G2U|1|v|A|181
8G2U|1|v|A|182
8G2U|1|v|C|183
8G2U|1|v|G|184
*
8G2U|1|v|C|193
8G2U|1|v|C|194
8G2U|1|v|A|195
8G2U|1|v|A|196
8G2U|1|v|A|197
8G2U|1|v|G|198
*
8G2U|1|v|U|219
8G2U|1|v|G|220
8G2U|1|v|C|221

Current chains

Chain v

16S rRNA

Nearby chains

Chain s

30S ribosomal protein S20