J4_8G31_003
3D structure
- PDB id
- 8G31 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAAG*CGAAG*CGAG*CGUUAAG
- Length
- 20 nucleotides
- Bulged bases
- 8G31|1|B|U|653, 8G31|1|B|A|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_8G31_003 not in the Motif Atlas
- Homologous match to J4_5J7L_020
- Geometric discrepancy: 0.4833
- The information below is about J4_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_60168.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
8G31|1|B|C|601
8G31|1|B|A|602
8G31|1|B|A|603
8G31|1|B|G|604
*
8G31|1|B|C|624
8G31|1|B|G|625
8G31|1|B|A|626
8G31|1|B|A|627
8G31|1|B|G|628
*
8G31|1|B|C|635
8G31|1|B|G|636
8G31|1|B|A|637
8G31|1|B|G|638
*
8G31|1|B|C|650
8G31|1|B|G|651
8G31|1|B|U|652
8G31|1|B|U|653
8G31|1|B|A|654
8G31|1|B|A|655
8G31|1|B|G|656
Current chains
- Chain B
- 23S
Nearby chains
- Chain 3
- 50S ribosomal protein L35
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
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