J4_8IP8_010

3D structure

PDB id

8IP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 80S ribosome stalled on AUG-Stop boron dependently

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAA*UC*GCCG*CAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP8|1|RB|U|3006
8IP8|1|RB|A|3007
8IP8|1|RB|A|3008
*
8IP8|1|RB|U|3038
8IP8|1|RB|C|3039
*
8IP8|1|RB|G|3094
8IP8|1|RB|C|3095
8IP8|1|RB|C|3096
8IP8|1|RB|G|3097
*
8IP8|1|RB|C|3129
8IP8|1|RB|A|3130
8IP8|1|RB|A|3131
8IP8|1|RB|G|3132

Current chains

Chain RB

60S ribosomal RNA

Nearby chains

Chain DB

60S ribosomal protein uL3

Chain FB

60S ribosomal protein uL13

Chain GA

60S ribosomal protein uL14