J4_8JSG_002

3D structure

PDB id

8JSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GGAG*CAUAACG*CCAAAG*UGCC

Length

21 nucleotides

Bulged bases

8JSG|1|g|C|183, 8JSG|1|g|A|197

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8JSG|1|g|G|141
8JSG|1|g|G|142
8JSG|1|g|A|143
8JSG|1|g|G|144
*
8JSG|1|g|C|178
8JSG|1|g|A|179
8JSG|1|g|U|180
8JSG|1|g|A|181
8JSG|1|g|A|182
8JSG|1|g|C|183
8JSG|1|g|G|184
*
8JSG|1|g|C|193
8JSG|1|g|C|194
8JSG|1|g|A|195
8JSG|1|g|A|196
8JSG|1|g|A|197
8JSG|1|g|G|198
*
8JSG|1|g|U|219
8JSG|1|g|G|220
8JSG|1|g|C|221
8JSG|1|g|C|222

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain 3

Small ribosomal subunit protein bS20