J4_8OIN_001
3D structure
- PDB id
- 8OIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAAG*CGCCCCGG*CAC*GAAACAG
- Length
- 22 nucleotides
- Bulged bases
- 8OIN|1|AA|A|54, 8OIN|1|AA|C|171
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIN|1|AA|C|52
8OIN|1|AA|A|53
8OIN|1|AA|A|54
8OIN|1|AA|G|55
*
8OIN|1|AA|C|62
8OIN|1|AA|G|63
8OIN|1|AA|C|64
8OIN|1|AA|C|65
8OIN|1|AA|C|66
8OIN|1|AA|C|67
8OIN|1|AA|G|68
8OIN|1|AA|G|69
*
8OIN|1|AA|C|156
8OIN|1|AA|A|157
8OIN|1|AA|C|158
*
8OIN|1|AA|G|167
8OIN|1|AA|A|168
8OIN|1|AA|A|169
8OIN|1|AA|A|170
8OIN|1|AA|C|171
8OIN|1|AA|A|172
8OIN|1|AA|G|173
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AM
- 28S ribosomal protein S16, mitochondrial
- Chain AU
- Mitochondrial ribosomal protein S26
- Chain Aj
- Mitochondrial ribosomal protein S34
- Chain BS
- Mitochondrial ribosomal protein L14
Coloring options: