J4_8OIN_005

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAAG*CU*AAAG*CAG

Length

13 nucleotides

Bulged bases

8OIN|1|B8|A|782, 8OIN|1|B8|A|783

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|B8|C|648
8OIN|1|B8|A|649
8OIN|1|B8|A|650
8OIN|1|B8|G|651
*
8OIN|1|B8|C|660
8OIN|1|B8|U|661
*
8OIN|1|B8|A|781
8OIN|1|B8|A|782
8OIN|1|B8|A|783
8OIN|1|B8|G|784
*
8OIN|1|B8|C|1003
8OIN|1|B8|A|1004
8OIN|1|B8|G|1005

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BA

uL22m

Chain BH

Mitochondrial ribosomal protein L32

Chain BV

bL17m

Chain Bi

39S ribosomal protein S30, mitochondrial