J4_8OIN_009

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AAA*UG*CAG*CAU

Length

11 nucleotides

Bulged bases

8OIN|1|B8|A|1504

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|B8|A|1446
8OIN|1|B8|A|1447
8OIN|1|B8|A|1448
*
8OIN|1|B8|U|1478
8OIN|1|B8|G|1479
*
8OIN|1|B8|C|1503
8OIN|1|B8|A|1504
8OIN|1|B8|G|1505
*
8OIN|1|B8|C|1541
8OIN|1|B8|A|1542
8OIN|1|B8|U|1543

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BM

ICT1

Chain BR

39S ribosomal protein L13, mitochondrial

Chain BS

Mitochondrial ribosomal protein L14