J4_8OIS_004
3D structure
- PDB id
- 8OIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUCA*UA(PSU)*AAAAUG*CC
- Length
- 15 nucleotides
- Bulged bases
- 8OIS|1|AG|U|8, 8OIS|1|AG|U|44
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIS|1|AG|G|7
8OIS|1|AG|U|8
8OIS|1|AG|C|9
8OIS|1|AG|A|10
*
8OIS|1|AG|U|22
8OIS|1|AG|A|23
8OIS|1|AG|PSU|24
*
8OIS|1|AG|A|40
8OIS|1|AG|A|41
8OIS|1|AG|A|42
8OIS|1|AG|A|43
8OIS|1|AG|U|44
8OIS|1|AG|G|45
*
8OIS|1|AG|C|60
8OIS|1|AG|C|61
Current chains
- Chain AG
- P-site Met-tRNA(Met)
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain Aa
- Peptide chain release factor 1, mitochondrial,mtRF1(AAQ)
Coloring options: