J4_8OVE_012
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GAAG*CC*GGU*AGUC
- Length
- 13 nucleotides
- Bulged bases
- 8OVE|1|BG|G|127
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OVE|1|BG|G|37
8OVE|1|BG|A|38
8OVE|1|BG|A|39
8OVE|1|BG|G|40
*
8OVE|1|BG|C|70
8OVE|1|BG|C|71
*
8OVE|1|BG|G|126
8OVE|1|BG|G|127
8OVE|1|BG|U|128
*
8OVE|1|BG|A|162
8OVE|1|BG|G|163
8OVE|1|BG|U|164
8OVE|1|BG|C|165
Current chains
- Chain BG
- SrRNA 2
Nearby chains
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BO
- 60S ribosomal protein L13a, putative
- Chain BW
- 60S ribosomal protein L23, putative
- Chain Bf
- Ribosomal protein L3, mitochondrial, putative
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