J4_8P16_001
3D structure
- PDB id
- 8P16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E167K RF2 on E. coli 70S release complex with UGG (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- CC*GAGUAG*UGAAUAUG*CAAG
- Length
- 20 nucleotides
- Bulged bases
- 8P16|1|1|U|405
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_8P16_001 not in the Motif Atlas
- Homologous match to J4_5J7L_018
- Geometric discrepancy: 0.1597
- The information below is about J4_5J7L_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_45801.6
- Basepair signature
- cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
8P16|1|1|C|268
8P16|1|1|C|269
*
8P16|1|1|G|370
8P16|1|1|A|371
8P16|1|1|G|372
8P16|1|1|U|373
8P16|1|1|A|374
8P16|1|1|G|375
*
8P16|1|1|U|399
8P16|1|1|G|400
8P16|1|1|A|401
8P16|1|1|A|402
8P16|1|1|U|403
8P16|1|1|A|404
8P16|1|1|U|405
8P16|1|1|G|406
*
8P16|1|1|C|421
8P16|1|1|A|422
8P16|1|1|A|423
8P16|1|1|G|424
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L9
- Chain X
- 50S ribosomal protein L28
Coloring options: