J4_8P2K_008
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- (OMC)AAAUAU*AGG*(OMC)AUGUU*AG
- Length
- 18 nucleotides
- Bulged bases
- 8P2K|1|B5|A|2209, 8P2K|1|B5|U|2212, 8P2K|1|B5|U|2671
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8P2K|1|B5|OMC|2208
8P2K|1|B5|A|2209
8P2K|1|B5|A|2210
8P2K|1|B5|A|2211
8P2K|1|B5|U|2212
8P2K|1|B5|A|2213
8P2K|1|B5|U|2214
*
8P2K|1|B5|A|2232
8P2K|1|B5|G|2233
8P2K|1|B5|G|2234
*
8P2K|1|B5|OMC|2667
8P2K|1|B5|A|2668
8P2K|1|B5|U|2669
8P2K|1|B5|G|2670
8P2K|1|B5|U|2671
8P2K|1|B5|U|2672
*
8P2K|1|B5|A|3588
8P2K|1|B5|G|3589
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BP
- uL22
- Chain BR
- Ribosomal protein L19
- Chain Bd
- 60S ribosomal protein L31
- Chain Nb
- Transcription factor BTF3
Coloring options: