J4_8P85_001

3D structure

PDB id

8P85 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Fluorolissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UC*GAGUCG*CUAAGUG*UAAA

Length

19 nucleotides

Bulged bases

8P85|1|1|U|298

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P85|1|1|U|112
8P85|1|1|C|113
*
8P85|1|1|G|267
8P85|1|1|A|268
8P85|1|1|G|269
8P85|1|1|U|270
8P85|1|1|C|271
8P85|1|1|G|272
*
8P85|1|1|C|293
8P85|1|1|U|294
8P85|1|1|A|295
8P85|1|1|A|296
8P85|1|1|G|297
8P85|1|1|U|298
8P85|1|1|G|299
*
8P85|1|1|U|316
8P85|1|1|A|317
8P85|1|1|A|318
8P85|1|1|A|319

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AI

60S ribosomal protein L35-A

Chain AJ

60S ribosomal protein L36-A

Chain t

60S ribosomal protein L13-A

Chain v

60S ribosomal protein L15-A