J4_8P85_021

3D structure

PDB id

8P85 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Fluorolissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CAUUAAAUC*GCC*GUAAC*GG

Length

19 nucleotides

Bulged bases

8P85|1|sR|A|359

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P85|1|sR|C|99
8P85|1|sR|A|100
8P85|1|sR|U|101
8P85|1|sR|U|102
8P85|1|sR|A|103
8P85|1|sR|A|104
8P85|1|sR|A|105
8P85|1|sR|U|106
8P85|1|sR|C|107
*
8P85|1|sR|G|307
8P85|1|sR|C|308
8P85|1|sR|C|309
*
8P85|1|sR|G|357
8P85|1|sR|U|358
8P85|1|sR|A|359
8P85|1|sR|A|360
8P85|1|sR|C|361
*
8P85|1|sR|G|383
8P85|1|sR|G|384

Current chains

Chain sR

16S ribosomal RNA

Nearby chains

Chain c1

40S ribosomal protein S11-A

Chain d3

40S ribosomal protein S23-A

Chain s4

40S ribosomal protein S4-A

Chain s8

40S ribosomal protein S8-A