J4_8QK7_012
3D structure
- PDB id
- 8QK7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E167K RF2 on E. coli 70S release complex with UAA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- GAGUAAUG*UG*CUAG*CC
- Length
- 16 nucleotides
- Bulged bases
- 8QK7|1|2|U|121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_8QK7_012 not in the Motif Atlas
- Homologous match to J4_5J7L_001
- Geometric discrepancy: 0.2419
- The information below is about J4_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_35578.3
- Basepair signature
- cWW-F-cWW-F-F-F-tHW-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8QK7|1|2|G|115
8QK7|1|2|A|116
8QK7|1|2|G|117
8QK7|1|2|U|118
8QK7|1|2|A|119
8QK7|1|2|A|120
8QK7|1|2|U|121
8QK7|1|2|G|122
*
8QK7|1|2|U|239
8QK7|1|2|G|240
*
8QK7|1|2|C|286
8QK7|1|2|U|287
8QK7|1|2|A|288
8QK7|1|2|G|289
*
8QK7|1|2|C|311
8QK7|1|2|C|312
Current chains
- Chain 2
- 16S rRNA
Nearby chains
- Chain u
- Small ribosomal subunit protein bS16
- Chain v
- Small ribosomal subunit protein uS17
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