J4_8QPP_015
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAGC*GAC*GGACG*CCC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_8QPP_015 not in the Motif Atlas
- Homologous match to J4_5J7L_028
- Geometric discrepancy: 0.1911
- The information below is about J4_5J7L_028
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_77044.4
- Basepair signature
- cWW-F-tHS-F-cWW-cWW-cWW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
8QPP|1|X|G|2672
8QPP|1|X|A|2673
8QPP|1|X|G|2674
8QPP|1|X|C|2675
*
8QPP|1|X|G|2703
8QPP|1|X|A|2704
8QPP|1|X|C|2705
*
8QPP|1|X|G|2760
8QPP|1|X|G|2761
8QPP|1|X|A|2762
8QPP|1|X|C|2763
8QPP|1|X|G|2764
*
8QPP|1|X|C|2798
8QPP|1|X|C|2799
8QPP|1|X|C|2800
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain a
- Large ribosomal subunit protein uL3
- Chain e
- Large ribosomal subunit protein uL13
- Chain f
- 50S ribosomal protein L14
Coloring options: