J4_8QYX_008

3D structure

PDB id

8QYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.78 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

8QYX|1|A2|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QYX|1|A2|G|2618
8QYX|1|A2|G|2619
*
8QYX|1|A2|U|2637
8QYX|1|A2|G|2638
8QYX|1|A2|U|2639
8QYX|1|A2|G|2640
8QYX|1|A2|A|2641
8QYX|1|A2|A|2642
*
8QYX|1|A2|U|2692
8QYX|1|A2|G|2693
8QYX|1|A2|G|2694
8QYX|1|A2|A|2695
8QYX|1|A2|A|2696
8QYX|1|A2|A|2697
8QYX|1|A2|G|2698
*
8QYX|1|A2|U|2718
8QYX|1|A2|C|2719

Current chains

Chain A2

28S rRNA

Nearby chains

Chain L1

60S ribosomal protein L19

Chain O1

60S ribosomal protein L22

Chain a1

60S ribosomal protein L34

Chain e1

60S ribosomal protein L38