J4_8R55_003

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GAC*GAUGGUUG*CAUAAAAG*CAC

Length

22 nucleotides

Bulged bases

8R55|1|A|G|181, 8R55|1|A|A|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8R55|1|A|G|141
8R55|1|A|A|142
8R55|1|A|C|143
*
8R55|1|A|G|177
8R55|1|A|A|178
8R55|1|A|U|179
8R55|1|A|G|180
8R55|1|A|G|181
8R55|1|A|U|182
8R55|1|A|U|183
8R55|1|A|G|184
*
8R55|1|A|C|205
8R55|1|A|A|206
8R55|1|A|U|207
8R55|1|A|A|208
8R55|1|A|A|209
8R55|1|A|A|210
8R55|1|A|A|211
8R55|1|A|G|212
*
8R55|1|A|C|227
8R55|1|A|A|228
8R55|1|A|C|229

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20