J4_8RCT_011

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GGGC*GAC*GGAAG*UGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_8RCT_011 not in the Motif Atlas

Homologous match to J4_5J7L_028

Geometric discrepancy: 0.0672

The information below is about J4_5J7L_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_77044.4

Basepair signature

cWW-F-tHS-F-cWW-cWW-cWW-F-cWW

Number of instances in this motif group

3

Unit IDs

8RCT|1|72|G|2643
8RCT|1|72|G|2644
8RCT|1|72|G|2645
8RCT|1|72|C|2646
*
8RCT|1|72|G|2674
8RCT|1|72|A|2675
8RCT|1|72|C|2676
*
8RCT|1|72|G|2731
8RCT|1|72|G|2732
8RCT|1|72|A|2733
8RCT|1|72|A|2734
8RCT|1|72|G|2735
*
8RCT|1|72|U|2769
8RCT|1|72|G|2770
8RCT|1|72|C|2771

Current chains

Chain 72

23S ribosomal RNA

Nearby chains