J4_8RDV_007

3D structure

PDB id

8RDV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon, mRNA and P-site tRNA (structure 2).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

AG*UGAAAG*UGAUAGC*GU

Length

17 nucleotides

Bulged bases

8RDV|1|Z2|U|1509

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RDV|1|Z2|A|1428
8RDV|1|Z2|G|1429
*
8RDV|1|Z2|U|1450
8RDV|1|Z2|G|1451
8RDV|1|Z2|A|1452
8RDV|1|Z2|A|1453
8RDV|1|Z2|A|1454
8RDV|1|Z2|G|1455
*
8RDV|1|Z2|U|1506
8RDV|1|Z2|G|1507
8RDV|1|Z2|A|1508
8RDV|1|Z2|U|1509
8RDV|1|Z2|A|1510
8RDV|1|Z2|G|1511
8RDV|1|Z2|C|1512
*
8RDV|1|Z2|G|1534
8RDV|1|Z2|U|1535

Current chains

Chain Z2

23S rRNA

Nearby chains