J4_8RDV_013

3D structure

PDB id

8RDV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon, mRNA and P-site tRNA (structure 2).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

UG*CAUACGAC*GAGAAAG*CG

Length

19 nucleotides

Bulged bases

8RDV|1|iN|A|242

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RDV|1|iN|U|188
8RDV|1|iN|G|189
*
8RDV|1|iN|C|223
8RDV|1|iN|A|224
8RDV|1|iN|U|225
8RDV|1|iN|A|226
8RDV|1|iN|C|227
8RDV|1|iN|G|228
8RDV|1|iN|A|229
8RDV|1|iN|C|230
*
8RDV|1|iN|G|237
8RDV|1|iN|A|238
8RDV|1|iN|G|239
8RDV|1|iN|A|240
8RDV|1|iN|A|241
8RDV|1|iN|A|242
8RDV|1|iN|G|243
*
8RDV|1|iN|C|262
8RDV|1|iN|G|263

Current chains

Chain iN

16S rRNA

Nearby chains

Chain To

Small ribosomal subunit protein bS20