J4_8S95_001
3D structure
- PDB id
- 8S95 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Poliovirus (type 1 Mahoney) cloverleaf RNA with tRNA scaffold
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AUAG*CAG*CGGGUCC*GU
- Length
- 16 nucleotides
- Bulged bases
- 8S95|1|C|U|8, 8S95|1|C|U|127, 8S95|1|C|C|128
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_70449.27
- Basepair signature
- cWW-F-cWW-cWW-cHS-F-cWW-cWW
- Number of instances in this motif group
- 53
Unit IDs
8S95|1|C|A|7
8S95|1|C|U|8
8S95|1|C|A|9
8S95|1|C|G|10
*
8S95|1|C|C|25
8S95|1|C|A|26
8S95|1|C|G|27
*
8S95|1|C|C|123
8S95|1|C|G|124
8S95|1|C|G|125
8S95|1|C|G|126
8S95|1|C|U|127
8S95|1|C|C|128
8S95|1|C|C|129
*
8S95|1|C|G|145
8S95|1|C|U|146
Current chains
- Chain C
- Lysine tRNA scaffold,Poliovirus cloverleaf RNA
Nearby chains
No other chains within 10ÅColoring options: