8S95 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_8S95_001 | 1/C/13:22 | No text annotation HL_23048.1 | ||
| HL_8S95_003 | 1/C/67:73 | UNCG variation HL_51020.2 | ||
| HL_8S95_006 | 1/C/92:97 | No text annotation HL_42985.1 | ||
| HL_8S95_005 | 1/C/133:141 | T-loop with 2 stacked bulged bases HL_33597.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_8S95_002 | No text annotation | ||
| HL_8S95_004 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_8S95_001 | 1/C/78:81, 1/C/108:109 | No text annotation IL_34520.2 | ||
| IL_8S95_002 | 1/C/84:88, 1/C/101:105 | Triple non-canonical cWW pairs IL_71154.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_8S95_001 | 1/C/7:10, 1/C/25:27, 1/C/123:129, 1/C/145:146 | Virus junction J4_95067.1 | ||
| J4_8S95_002 | 1/C/39:40, 1/C/64:65, 1/C/75:77, 1/C/110:111 | No text annotation J4_86610.1 |
Problematic loops
No problematic loops
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