J4_8T2Z_005

3D structure

PDB id

8T2Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GG*CUUAAC*GGAAGAG*UC

Length

17 nucleotides

Bulged bases

8T2Z|1|A1|G|1751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8T2Z|1|A1|G|1674
8T2Z|1|A1|G|1675
*
8T2Z|1|A1|C|1693
8T2Z|1|A1|U|1694
8T2Z|1|A1|U|1695
8T2Z|1|A1|A|1696
8T2Z|1|A1|A|1697
8T2Z|1|A1|C|1698
*
8T2Z|1|A1|G|1747
8T2Z|1|A1|G|1748
8T2Z|1|A1|A|1749
8T2Z|1|A1|A|1750
8T2Z|1|A1|G|1751
8T2Z|1|A1|A|1752
8T2Z|1|A1|G|1753
*
8T2Z|1|A1|U|1772
8T2Z|1|A1|C|1773

Current chains

Chain A1

25S rRNA

Nearby chains

Chain AU

60S ribosomal protein L22-A

Chain Ag

60S ribosomal protein L34-A

Chain Ak

RPL38 isoform 1