J4_8URM_013

3D structure

PDB id

8URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

8URM|1|2|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8URM|1|2|G|142
8URM|1|2|A|143
8URM|1|2|G|144
*
8URM|1|2|C|178
8URM|1|2|A|179
8URM|1|2|U|180
8URM|1|2|A|181
8URM|1|2|A|182
8URM|1|2|C|183
8URM|1|2|G|184
*
8URM|1|2|C|193
8URM|1|2|C|194
8URM|1|2|A|195
8URM|1|2|A|196
8URM|1|2|A|197
8URM|1|2|G|198
*
8URM|1|2|U|219
8URM|1|2|G|220
8URM|1|2|C|221

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain y

30S ribosomal protein S20