J4_8UT0_010

3D structure

PDB id

8UT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.22 Å

Loop

Sequence

CUAAGG*CUUGAU*ACC*GUG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UT0|1|A|C|2654
8UT0|1|A|U|2655
8UT0|1|A|A|2656
8UT0|1|A|A|2657
8UT0|1|A|G|2658
8UT0|1|A|G|2659
*
8UT0|1|A|C|2711
8UT0|1|A|U|2712
8UT0|1|A|U|2713
8UT0|1|A|G|2714
8UT0|1|A|A|2715
8UT0|1|A|U|2716
*
8UT0|1|A|A|2740
8UT0|1|A|C|2741
8UT0|1|A|C|2742
*
8UT0|1|A|G|2751
8UT0|1|A|U|2752
8UT0|1|A|G|2753

Current chains

Chain A

25S rRNA

Nearby chains

Chain LG

60S ribosomal protein L5

Chain LV

60S ribosomal protein L21-A

Chain Ld

60S ribosomal protein L29

Chain Lq

60S ribosomal protein L42-A