J4_8UTI_005
3D structure
- PDB id
- 8UTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- GG*CU*AG*UC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_8UTI_005 not in the Motif Atlas
- Homologous match to J4_8C3A_005
- Geometric discrepancy: 0.0975
- The information below is about J4_8C3A_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UTI|1|A|G|1674
8UTI|1|A|G|1675
*
8UTI|1|A|C|1693
8UTI|1|A|U|1694
*
8UTI|1|A|A|1752
8UTI|1|A|G|1753
*
8UTI|1|A|U|1772
8UTI|1|A|C|1773
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LT
- 60S ribosomal protein L19-A
- Chain LW
- 60S ribosomal protein L22-A
- Chain Li
- 60S ribosomal protein L34-A
- Chain Lm
- 60S ribosomal protein L38
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