3D structure

PDB id
8UX8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
AACUG*CACAG*UGAC*GUAAU
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UX8|1|1|A|1772
8UX8|1|1|A|1773
8UX8|1|1|C|1774
8UX8|1|1|U|1775
8UX8|1|1|G|1776
*
8UX8|1|1|C|1788
8UX8|1|1|A|1789
8UX8|1|1|C|1790
8UX8|1|1|A|1791
8UX8|1|1|G|1792
*
8UX8|1|1|U|1827
8UX8|1|1|G|1828
8UX8|1|1|A|1829
8UX8|1|1|C|1830
*
8UX8|1|1|G|1975
8UX8|1|1|U|1976
8UX8|1|1|A|1977
8UX8|1|1|A|1978
8UX8|1|1|U|1979

Current chains

Chain 1
23S rRNA

Nearby chains

Chain 2
Small subunit ribosomal RNA; SSU rRNA
Chain B
50S ribosomal protein L2

Coloring options:

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