J4_8UXB_004

3D structure

PDB id

8UXB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAUAAA*UC*GCUU*AG

Length

15 nucleotides

Bulged bases

8UXB|1|1|G|1271, 8UXB|1|1|A|1272, 8UXB|1|1|U|1273, 8UXB|1|1|A|1275, 8UXB|1|1|U|1647

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UXB|1|1|C|1270
8UXB|1|1|G|1271
8UXB|1|1|A|1272
8UXB|1|1|U|1273
8UXB|1|1|A|1274
8UXB|1|1|A|1275
8UXB|1|1|A|1276
*
8UXB|1|1|U|1294
8UXB|1|1|C|1295
*
8UXB|1|1|G|1645
8UXB|1|1|C|1646
8UXB|1|1|U|1647
8UXB|1|1|U|1648
*
8UXB|1|1|A|2009
8UXB|1|1|G|2010

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain N

50S ribosomal protein L17

Chain S

50S ribosomal protein L22

Chain b

50S ribosomal protein L32