J4_8UYP_017

3D structure

PDB id

8UYP (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-1 5' proximal stem-loop 5

Experimental method

ELECTRON MICROSCOPY

Resolution

7.1 Å

Loop

Sequence

UC*GC*GA*UA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UYP|17|A|U|181
8UYP|17|A|C|182
*
8UYP|17|A|G|226
8UYP|17|A|C|227
*
8UYP|17|A|G|251
8UYP|17|A|A|252
*
8UYP|17|A|U|261
8UYP|17|A|A|262

Current chains

Chain A

SARS-CoV-1 5' proximal stem-loop 5

Nearby chains