3D structure

PDB id
8V03 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
CAAG*CGAAG*CGAG*CGUUAAG
Length
20 nucleotides
Bulged bases
8V03|1|1|U|653, 8V03|1|1|A|654
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8V03|1|1|C|601
8V03|1|1|A|602
8V03|1|1|A|603
8V03|1|1|G|604
*
8V03|1|1|C|624
8V03|1|1|G|625
8V03|1|1|A|626
8V03|1|1|A|627
8V03|1|1|G|628
*
8V03|1|1|C|635
8V03|1|1|G|636
8V03|1|1|A|637
8V03|1|1|G|638
*
8V03|1|1|C|650
8V03|1|1|G|651
8V03|1|1|U|652
8V03|1|1|U|653
8V03|1|1|A|654
8V03|1|1|A|655
8V03|1|1|G|656

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain D
50S ribosomal protein L4
Chain L
50S ribosomal protein L15
Chain e
50S ribosomal protein L35

Coloring options:

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