J4_8V03_013

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

8V03|1|2|C|183, 8V03|1|2|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V03|1|2|G|142
8V03|1|2|A|143
8V03|1|2|G|144
*
8V03|1|2|C|178
8V03|1|2|A|179
8V03|1|2|U|180
8V03|1|2|A|181
8V03|1|2|A|182
8V03|1|2|C|183
8V03|1|2|G|184
*
8V03|1|2|C|193
8V03|1|2|C|194
8V03|1|2|A|195
8V03|1|2|A|196
8V03|1|2|A|197
8V03|1|2|G|198
*
8V03|1|2|U|219
8V03|1|2|G|220
8V03|1|2|C|221

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain y

30S ribosomal protein S20