J4_8V03_014

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GCG*CGAAAG*CCGUAAACGAUG*CC

Length

23 nucleotides

Bulged bases

8V03|1|2|C|576, 8V03|1|2|A|815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V03|1|2|G|575
8V03|1|2|C|576
8V03|1|2|G|577
*
8V03|1|2|C|764
8V03|1|2|G|765
8V03|1|2|A|766
8V03|1|2|A|767
8V03|1|2|A|768
8V03|1|2|G|769
*
8V03|1|2|C|810
8V03|1|2|C|811
8V03|1|2|G|812
8V03|1|2|U|813
8V03|1|2|A|814
8V03|1|2|A|815
8V03|1|2|A|816
8V03|1|2|C|817
8V03|1|2|G|818
8V03|1|2|A|819
8V03|1|2|U|820
8V03|1|2|G|821
*
8V03|1|2|C|879
8V03|1|2|C|880

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain m

Small ribosomal subunit protein uS8

Chain q

Small ribosomal subunit protein uS12

Chain t

Small ribosomal subunit protein uS15

Chain v

Small ribosomal subunit protein uS17

Chain z

30S ribosomal protein S21