J4_8V9K_006

3D structure

PDB id

8V9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUAC*GGG*CAUAG*CGAAUUC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V9K|1|A|G|1664
8V9K|1|A|U|1665
8V9K|1|A|A|1666
8V9K|1|A|C|1667
*
8V9K|1|A|G|1686
8V9K|1|A|G|1687
8V9K|1|A|G|1688
*
8V9K|1|A|C|1747
8V9K|1|A|A|1748
8V9K|1|A|U|1749
8V9K|1|A|A|1750
8V9K|1|A|G|1751
*
8V9K|1|A|C|1762
8V9K|1|A|G|1763
8V9K|1|A|A|1764
8V9K|1|A|A|1765
8V9K|1|A|U|1766
8V9K|1|A|U|1767
8V9K|1|A|C|1768

Current chains

Chain A

23S Ribosomal RNA

Nearby chains