J4_8V9K_012
3D structure
- PDB id
- 8V9K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUU*GAAUACAC*GGAAAG*CG
- Length
- 19 nucleotides
- Bulged bases
- 8V9K|1|a|C|179, 8V9K|1|a|A|180, 8V9K|1|a|A|211
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8V9K|1|a|U|140
8V9K|1|a|U|141
8V9K|1|a|U|142
*
8V9K|1|a|G|174
8V9K|1|a|A|175
8V9K|1|a|A|176
8V9K|1|a|U|177
8V9K|1|a|A|178
8V9K|1|a|C|179
8V9K|1|a|A|180
8V9K|1|a|C|181
*
8V9K|1|a|G|207
8V9K|1|a|G|208
8V9K|1|a|A|209
8V9K|1|a|A|210
8V9K|1|a|A|211
8V9K|1|a|G|212
*
8V9K|1|a|C|219
8V9K|1|a|G|220
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain q
- 30S ribosomal protein S17
- Chain t
- 30S ribosomal protein S20
Coloring options: