J4_8VFT_007

3D structure

PDB id

8VFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 80S rabbit ribosome stalled by emetine with eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

8VFT|1|5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VFT|1|5|G|2618
8VFT|1|5|G|2619
*
8VFT|1|5|U|2637
8VFT|1|5|G|2638
8VFT|1|5|U|2639
8VFT|1|5|G|2640
8VFT|1|5|A|2641
8VFT|1|5|A|2642
*
8VFT|1|5|U|2692
8VFT|1|5|G|2693
8VFT|1|5|G|2694
8VFT|1|5|A|2695
8VFT|1|5|A|2696
8VFT|1|5|A|2697
8VFT|1|5|G|2698
*
8VFT|1|5|U|2718
8VFT|1|5|C|2719

Current chains

Chain 5

28S rRNA

Nearby chains

Chain R

eL19

Chain U

eL22

Chain g

eL34

Chain k

eL38