J4_8VOO_008
3D structure
- PDB id
- 8VOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 39 nt long spacer, ops signal, RfaH, NusA, and fMet-tRNAs in E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAAG*CGAAG*CGAG*CGUUAAG
- Length
- 20 nucleotides
- Bulged bases
- 8VOO|1|a|U|653, 8VOO|1|a|A|654
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VOO|1|a|C|601
8VOO|1|a|A|602
8VOO|1|a|A|603
8VOO|1|a|G|604
*
8VOO|1|a|C|624
8VOO|1|a|G|625
8VOO|1|a|A|626
8VOO|1|a|A|627
8VOO|1|a|G|628
*
8VOO|1|a|C|635
8VOO|1|a|G|636
8VOO|1|a|A|637
8VOO|1|a|G|638
*
8VOO|1|a|C|650
8VOO|1|a|G|651
8VOO|1|a|U|652
8VOO|1|a|U|653
8VOO|1|a|A|654
8VOO|1|a|A|655
8VOO|1|a|G|656
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain l
- 50S ribosomal protein L4
- Chain o
- 50S ribosomal protein L35
- Chain u
- 50S ribosomal protein L15
Coloring options: