J4_8VV4_007

3D structure

PDB id

8VV4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AACUG*CACAG*UGAC*GUAAU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VV4|1|1|A|1772
8VV4|1|1|A|1773
8VV4|1|1|C|1774
8VV4|1|1|U|1775
8VV4|1|1|G|1776
*
8VV4|1|1|C|1788
8VV4|1|1|A|1789
8VV4|1|1|C|1790
8VV4|1|1|A|1791
8VV4|1|1|G|1792
*
8VV4|1|1|U|1827
8VV4|1|1|G|1828
8VV4|1|1|A|1829
8VV4|1|1|C|1830
*
8VV4|1|1|G|1975
8VV4|1|1|U|1976
8VV4|1|1|A|1977
8VV4|1|1|A|1978
8VV4|1|1|U|1979

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L2