J4_8VV4_012

3D structure

PDB id

8VV4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

8VV4|1|2|C|183, 8VV4|1|2|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VV4|1|2|G|142
8VV4|1|2|A|143
8VV4|1|2|G|144
*
8VV4|1|2|C|178
8VV4|1|2|A|179
8VV4|1|2|U|180
8VV4|1|2|A|181
8VV4|1|2|A|182
8VV4|1|2|C|183
8VV4|1|2|G|184
*
8VV4|1|2|C|193
8VV4|1|2|C|194
8VV4|1|2|A|195
8VV4|1|2|A|196
8VV4|1|2|A|197
8VV4|1|2|G|198
*
8VV4|1|2|U|219
8VV4|1|2|G|220
8VV4|1|2|C|221

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain y

30S ribosomal protein S20