J4_8VVQ_007
3D structure
- PDB id
- 8VVQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UCUCC*GCCGG*CCACGC*GGAGCGAG
- Length
- 24 nucleotides
- Bulged bases
- 8VVQ|1|WA|C|1243, 8VVQ|1|WA|A|1272, 8VVQ|1|WA|G|1273, 8VVQ|1|WA|C|1274
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVQ|1|WA|U|986
8VVQ|1|WA|C|987
8VVQ|1|WA|U|988
8VVQ|1|WA|C|989
8VVQ|1|WA|C|990
*
8VVQ|1|WA|G|1076
8VVQ|1|WA|C|1077
8VVQ|1|WA|C|1078
8VVQ|1|WA|G|1079
8VVQ|1|WA|G|1080
*
8VVQ|1|WA|C|1242
8VVQ|1|WA|C|1243
8VVQ|1|WA|A|1244
8VVQ|1|WA|C|1245
8VVQ|1|WA|G|1246
8VVQ|1|WA|C|1247
*
8VVQ|1|WA|G|1270
8VVQ|1|WA|G|1271
8VVQ|1|WA|A|1272
8VVQ|1|WA|G|1273
8VVQ|1|WA|C|1274
8VVQ|1|WA|G|1275
8VVQ|1|WA|A|1276
8VVQ|1|WA|G|1277
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain AA
- L29
- Chain C
- uL4
- Chain E
- L6
- Chain F
- uL30
Coloring options: