J4_8VVR_008

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAAAUAU*AGG*CAUGUU*AG

Length

18 nucleotides

Bulged bases

8VVR|1|WA|A|2368, 8VVR|1|WA|U|2371, 8VVR|1|WA|U|2830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|WA|C|2367
8VVR|1|WA|A|2368
8VVR|1|WA|A|2369
8VVR|1|WA|A|2370
8VVR|1|WA|U|2371
8VVR|1|WA|A|2372
8VVR|1|WA|U|2373
*
8VVR|1|WA|A|2391
8VVR|1|WA|G|2392
8VVR|1|WA|G|2393
*
8VVR|1|WA|C|2826
8VVR|1|WA|A|2827
8VVR|1|WA|U|2828
8VVR|1|WA|G|2829
8VVR|1|WA|U|2830
8VVR|1|WA|U|2831
*
8VVR|1|WA|A|3858
8VVR|1|WA|G|3859

Current chains

Chain WA

28S rRNA

Nearby chains

Chain CA

L31

Chain O

uL22

Chain Q

eL19