J4_8VVT_005
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGUUC*GGUCAG*UC*GGCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 8VVT|1|WA|C|2442
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVT|1|WA|G|2411
8VVT|1|WA|G|2412
8VVT|1|WA|U|2413
8VVT|1|WA|U|2414
8VVT|1|WA|C|2415
*
8VVT|1|WA|G|2439
8VVT|1|WA|G|2440
8VVT|1|WA|U|2441
8VVT|1|WA|C|2442
8VVT|1|WA|A|2443
8VVT|1|WA|G|2444
*
8VVT|1|WA|U|2543
8VVT|1|WA|C|2544
*
8VVT|1|WA|G|2782
8VVT|1|WA|G|2783
8VVT|1|WA|C|2784
8VVT|1|WA|C|2785
8VVT|1|WA|G|2786
8VVT|1|WA|U|2787
8VVT|1|WA|A|2788
8VVT|1|WA|C|2789
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain FA
- eL34
- Chain GA
- uL29
- Chain IA
- L37
- Chain JA
- eL38
- Chain KA
- eL39
- Chain Q
- eL19
- Chain W
- uL23
- Chain YA
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain b
- Proliferation-associated protein 2G4
Coloring options: