J4_8VVT_007

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

8VVT|1|WA|A|2701

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|G|2623
8VVT|1|WA|G|2624
*
8VVT|1|WA|U|2642
8VVT|1|WA|G|2643
8VVT|1|WA|U|2644
8VVT|1|WA|G|2645
8VVT|1|WA|A|2646
8VVT|1|WA|A|2647
*
8VVT|1|WA|U|2697
8VVT|1|WA|G|2698
8VVT|1|WA|G|2699
8VVT|1|WA|A|2700
8VVT|1|WA|A|2701
8VVT|1|WA|A|2702
8VVT|1|WA|G|2703
*
8VVT|1|WA|U|2723
8VVT|1|WA|C|2724

Current chains

Chain WA

28S rRNA

Nearby chains

Chain FA

eL34

Chain JA

eL38

Chain Q

eL19

Chain T

eL22