J4_8VVT_010

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAAG*UUG*CC*GGG

Length

13 nucleotides

Bulged bases

8VVT|1|WA|A|4239

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|C|4236
8VVT|1|WA|U|4237
8VVT|1|WA|A|4238
8VVT|1|WA|A|4239
8VVT|1|WA|G|4240
*
8VVT|1|WA|U|4294
8VVT|1|WA|U|4295
8VVT|1|WA|G|4296
*
8VVT|1|WA|C|4323
8VVT|1|WA|C|4324
*
8VVT|1|WA|G|4333
8VVT|1|WA|G|4334
8VVT|1|WA|G|4335

Current chains

Chain WA

28S rRNA

Nearby chains

Chain D

L5

Chain NA

eL42

Chain S

eL21