J4_8VVT_011

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUAA*(OMU)C*GUG*CGCC

Length

13 nucleotides

Bulged bases

8VVT|1|WA|U|4682

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|G|4592
8VVT|1|WA|U|4593
8VVT|1|WA|A|4594
8VVT|1|WA|A|4595
*
8VVT|1|WA|OMU|4625
8VVT|1|WA|C|4626
*
8VVT|1|WA|G|4681
8VVT|1|WA|U|4682
8VVT|1|WA|G|4683
*
8VVT|1|WA|C|4717
8VVT|1|WA|G|4718
8VVT|1|WA|C|4719
8VVT|1|WA|C|4720

Current chains

Chain WA

28S rRNA

Nearby chains

Chain B

uL3

Chain N

uL13

Chain U

L23