J4_8VVU_010

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

8VVU|1|WA|A|2698

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|WA|G|2620
8VVU|1|WA|G|2621
*
8VVU|1|WA|U|2639
8VVU|1|WA|G|2640
8VVU|1|WA|U|2641
8VVU|1|WA|G|2642
8VVU|1|WA|A|2643
8VVU|1|WA|A|2644
*
8VVU|1|WA|U|2694
8VVU|1|WA|G|2695
8VVU|1|WA|G|2696
8VVU|1|WA|A|2697
8VVU|1|WA|A|2698
8VVU|1|WA|A|2699
8VVU|1|WA|G|2700
*
8VVU|1|WA|U|2720
8VVU|1|WA|C|2721

Current chains

Chain WA

28S rRNA

Nearby chains

Chain FA

L34

Chain JA

eL38

Chain Q

eL19

Chain T

eL22