J4_8VVV_004
3D structure
- PDB id
- 8VVV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the nonrotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUUC*GGUCAG*UC*GGCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 8VVV|1|5|C|2443
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVV|1|5|G|2412
8VVV|1|5|G|2413
8VVV|1|5|U|2414
8VVV|1|5|U|2415
8VVV|1|5|C|2416
*
8VVV|1|5|G|2440
8VVV|1|5|G|2441
8VVV|1|5|U|2442
8VVV|1|5|C|2443
8VVV|1|5|A|2444
8VVV|1|5|G|2445
*
8VVV|1|5|U|2544
8VVV|1|5|C|2545
*
8VVV|1|5|G|2783
8VVV|1|5|G|2784
8VVV|1|5|C|2785
8VVV|1|5|C|2786
8VVV|1|5|G|2787
8VVV|1|5|U|2788
8VVV|1|5|A|2789
8VVV|1|5|C|2790
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain R
- eL19
- Chain X
- uL23
- Chain g
- eL34
- Chain h
- uL29
- Chain j
- eL37
- Chain k
- eL38
- Chain l
- eL39
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