J4_8VWQ_003
3D structure
- PDB id
- 8VWQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the closed conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAUAAA*UC*GCUU*AG
- Length
- 15 nucleotides
- Bulged bases
- 8VWQ|1|1|G|1271, 8VWQ|1|1|A|1272, 8VWQ|1|1|U|1273, 8VWQ|1|1|U|1647
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VWQ|1|1|C|1270
8VWQ|1|1|G|1271
8VWQ|1|1|A|1272
8VWQ|1|1|U|1273
8VWQ|1|1|A|1274
8VWQ|1|1|A|1275
8VWQ|1|1|A|1276
*
8VWQ|1|1|U|1294
8VWQ|1|1|C|1295
*
8VWQ|1|1|G|1645
8VWQ|1|1|C|1646
8VWQ|1|1|U|1647
8VWQ|1|1|U|1648
*
8VWQ|1|1|A|2009
8VWQ|1|1|G|2010
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain N
- Large ribosomal subunit protein bL17
- Chain S
- 50S ribosomal protein L22
- Chain b
- 50S ribosomal protein L32
Coloring options: