J4_8VWQ_010

3D structure

PDB id

8VWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the closed conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGC*GAC*GGAAG*UGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VWQ|1|1|G|2643
8VWQ|1|1|G|2644
8VWQ|1|1|G|2645
8VWQ|1|1|C|2646
*
8VWQ|1|1|G|2674
8VWQ|1|1|A|2675
8VWQ|1|1|C|2676
*
8VWQ|1|1|G|2731
8VWQ|1|1|G|2732
8VWQ|1|1|A|2733
8VWQ|1|1|A|2734
8VWQ|1|1|G|2735
*
8VWQ|1|1|U|2769
8VWQ|1|1|G|2770
8VWQ|1|1|C|2771

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain K

50S ribosomal protein L14