3D structure

PDB id
8W2N (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
AACUG*CACAG*UGAC*GUAAU
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8W2N|1|1|A|1772
8W2N|1|1|A|1773
8W2N|1|1|C|1774
8W2N|1|1|U|1775
8W2N|1|1|G|1776
*
8W2N|1|1|C|1788
8W2N|1|1|A|1789
8W2N|1|1|C|1790
8W2N|1|1|A|1791
8W2N|1|1|G|1792
*
8W2N|1|1|U|1827
8W2N|1|1|G|1828
8W2N|1|1|A|1829
8W2N|1|1|C|1830
*
8W2N|1|1|G|1975
8W2N|1|1|U|1976
8W2N|1|1|A|1977
8W2N|1|1|A|1978
8W2N|1|1|U|1979

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain B
50S ribosomal protein L2

Coloring options:

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