J4_8W2N_012

3D structure

PDB id

8W2N (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

8W2N|1|2|C|183, 8W2N|1|2|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8W2N|1|2|G|142
8W2N|1|2|A|143
8W2N|1|2|G|144
*
8W2N|1|2|C|178
8W2N|1|2|A|179
8W2N|1|2|U|180
8W2N|1|2|A|181
8W2N|1|2|A|182
8W2N|1|2|C|183
8W2N|1|2|G|184
*
8W2N|1|2|C|193
8W2N|1|2|C|194
8W2N|1|2|A|195
8W2N|1|2|A|196
8W2N|1|2|A|197
8W2N|1|2|G|198
*
8W2N|1|2|U|219
8W2N|1|2|G|220
8W2N|1|2|C|221

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain y

30S ribosomal protein S20